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How to Effectively Explode List-Like Columns in Pandas DataFrames?

Barbara Streisand
Release: 2024-11-27 15:44:11
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How to Effectively Explode List-Like Columns in Pandas DataFrames?

Exploding List-Like Columns: A Guide to Expanding Dataframes

Problem:

In Pandas dataframes, some cells may contain lists of multiple values. The goal is to transform the dataframe so that each list element occupies a separate row, while preserving values in other columns.

Solution:

Method 1: repeat()

Prior to Pandas 0.25, the repeat() method was commonly used to explode list columns:

import pandas as pd
import numpy as np

df = pd.DataFrame(
    {'trial_num': [1, 2, 3, 1, 2, 3],
     'subject': [1, 1, 1, 2, 2, 2],
     'samples': [list(np.random.randn(3).round(2)) for i in range(6)]
    }
)

# Expand 'samples' column into separate rows using repeat()
df_exploded = df.assign(
    samples=df['samples'].str.join(',').str.split(',')
).explode('samples')

df_exploded = df_exploded.reset_index(drop=True)

# Add sample_num column to track list element order
df_exploded['sample_num'] = df_exploded.groupby('trial_num').cumcount()
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Method 2: explode() (Pandas >= 0.25)

With the release of Pandas 0.25, the .explode() method provides an elegant solution:

df.explode('samples').reset_index(drop=True)
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This method automatically handles empty lists and preserves NaNs, ensuring a comprehensive conversion.

Note:

  • The repeat-based method can handle exploding columns of strings, but requires splitting on a separator first.
  • The explode() method explodes a single column at a time.
  • Exploded dataframes may require further processing to establish a unique index and renumber list elements.

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