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How Can I Efficiently Create a Pandas DataFrame from a Nested Dictionary with Hierarchical Data?

Linda Hamilton
Release: 2024-12-14 10:58:12
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How Can I Efficiently Create a Pandas DataFrame from a Nested Dictionary with Hierarchical Data?

Constructing Pandas DataFrames from Nested Dictionary Items

Given a nested dictionary with a structure featuring a UserId as the top level, Categories as the second level, and various attributes as the third level, the goal is to create a pandas DataFrame with a hierarchical index. Each UserID should appear as an index value, while Category and attribute values form the column names.

Conventional attempts to construct a DataFrame from such a dictionary may result in incorrect index and column assignment. To address this, consider the following approaches:

1. Reshaping the Dictionary:

One solution involves reshaping the dictionary into a format where keys are tuples representing the desired MultiIndex. This allows the use of pd.DataFrame.from_dict with orient='index':

user_dict = {
    12: {'Category 1': {'att_1': 1, 'att_2': 'whatever'},
         'Category 2': {'att_1': 23, 'att_2': 'another'}},
    15: {'Category 1': {'att_1': 10, 'att_2': 'foo'},
         'Category 2': {'att_1': 30, 'att_2': 'bar'}}
}

df = pd.DataFrame.from_dict({(i,j): user_dict[i][j] 
                           for i in user_dict.keys() 
                           for j in user_dict[i].keys()},
                       orient='index')
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2. Concatenating DataFrames:

Alternatively, one can build the DataFrame by constructing individual dataframes for each category and user, then concatenating them:

user_ids = []
frames = []

for user_id, d in user_dict.iteritems():
    user_ids.append(user_id)
    frames.append(pd.DataFrame.from_dict(d, orient='index'))

df = pd.concat(frames, keys=user_ids)
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Both approaches produce a DataFrame with the desired hierarchical index and column structure:

               att_1     att_2
12 Category 1      1  whatever
   Category 2     23   another
15 Category 1     10       foo
   Category 2     30       bar
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